HL_8BHP_112

3D structure

PDB id

8BHP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BHP_112 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.1478

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

8BHP|1|0|G|2304
8BHP|1|0|U|2305
8BHP|1|0|C|2306
8BHP|1|0|G|2307
8BHP|1|0|G|2308
8BHP|1|0|A|2309
8BHP|1|0|C|2310
8BHP|1|0|A|2311
8BHP|1|0|U|2312

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain D

50S ribosomal protein L5