HL_8BIL_013

3D structure

PDB id

8BIL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8BIL|1|0|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIL_013 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1244

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8BIL|1|0|G|410
8BIL|1|0|G|411
8BIL|1|0|A|412
8BIL|1|0|C|413
8BIL|1|0|C|414
8BIL|1|0|A|415
8BIL|1|0|U|416
8BIL|1|0|C|417

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains