HL_8BIM_075
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 8BIM|1|2|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BIM_075 not in the Motif Atlas
- Homologous match to HL_5J7L_006
- Geometric discrepancy: 0.0969
- The information below is about HL_5J7L_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8BIM|1|2|G|259
8BIM|1|2|G|260
8BIM|1|2|U|261
8BIM|1|2|A|262
8BIM|1|2|A|263
8BIM|1|2|C|264
8BIM|1|2|G|265
8BIM|1|2|G|266
8BIM|1|2|C|267
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain u
- 30S ribosomal protein S17
- Chain x
- 30S ribosomal protein S20
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