HL_8BIM_090
3D structure
- PDB id
- 8BIM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.04 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 8BIM|1|2|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BIM_090 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.097
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8BIM|1|2|G|963
8BIM|1|2|A|964
8BIM|1|2|U|965
8BIM|1|2|G|966
8BIM|1|2|C|967
8BIM|1|2|A|968
8BIM|1|2|A|969
8BIM|1|2|C|970
8BIM|1|2|G|971
8BIM|1|2|C|972
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain m
- 30S ribosomal protein S9
- Chain n
- 30S ribosomal protein S10
- Chain q
- 30S ribosomal protein S13
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