HL_8BIP_044

3D structure

PDB id

8BIP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

8BIP|1|1|U|2010

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BIP_044 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1709

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8BIP|1|1|G|2008
8BIP|1|1|C|2009
8BIP|1|1|U|2010
8BIP|1|1|U|2011
8BIP|1|1|G|2012
8BIP|1|1|C|2013

Current chains

Chain 1

25S rRNA

Nearby chains