HL_8BJQ_045

3D structure

PDB id

8BJQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUAC

Length

5 nucleotides

Bulged bases

8BJQ|1|1|G|2111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BJQ_045 not in the Motif Atlas

Homologous match to HL_8C3A_045

Geometric discrepancy: 0.1163

The information below is about HL_8C3A_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

8BJQ|1|1|G|2110
8BJQ|1|1|G|2111
8BJQ|1|1|U|2112
8BJQ|1|1|A|2113
8BJQ|1|1|C|2114

Current chains

Chain 1

25S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19-A

Chain LW

60S ribosomal protein L24-A