HL_8BR8_031

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

UCCCGACAGCCGAA

Length

14 nucleotides

Bulged bases

8BR8|1|Lt|C|921

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|U|918
8BR8|1|Lt|C|919
8BR8|1|Lt|C|920
8BR8|1|Lt|C|921
8BR8|1|Lt|G|922
8BR8|1|Lt|A|923
8BR8|1|Lt|C|980
8BR8|1|Lt|A|981
8BR8|1|Lt|G|982
8BR8|1|Lt|C|983
8BR8|1|Lt|C|984
8BR8|1|Lt|G|985
8BR8|1|Lt|A|986
8BR8|1|Lt|A|987

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LT

60S ribosomal protein L18a