HL_8BR8_054

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GGGAGGCCGCGCCCCUGAGACACC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|G|1953
8BR8|1|Lt|G|1954
8BR8|1|Lt|G|1955
8BR8|1|Lt|A|1956
8BR8|1|Lt|G|1957
8BR8|1|Lt|G|1958
8BR8|1|Lt|C|1959
8BR8|1|Lt|C|1960
8BR8|1|Lt|G|1961
8BR8|1|Lt|C|1962
8BR8|1|Lt|G|1963
8BR8|1|Lt|C|1964
8BR8|1|Lt|C|1965
8BR8|1|Lt|C|1966
8BR8|1|Lt|C|1967
8BR8|1|Lt|U|1968
8BR8|1|Lt|G|1969
8BR8|1|Lt|A|1970
8BR8|1|Lt|G|1971
8BR8|1|Lt|A|1972
8BR8|1|Lt|C|1973
8BR8|1|Lt|A|1974
8BR8|1|Lt|C|1975
8BR8|1|Lt|C|1976

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain Ln

Ribosomal protein L10a

Chain Lu

Transfer RNA; tRNA