HL_8BR8_060

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CCCCCGUGCCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|C|2147
8BR8|1|Lt|C|2148
8BR8|1|Lt|C|2149
8BR8|1|Lt|C|2150
8BR8|1|Lt|C|2151
8BR8|1|Lt|G|2152
8BR8|1|Lt|U|2153
8BR8|1|Lt|G|2154
8BR8|1|Lt|C|2155
8BR8|1|Lt|C|2156
8BR8|1|Lt|G|2157

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LR

Ribosomal protein L18

Chain LU

Ribosomal protein L21

Chain Lb

Ribosomal protein L27a

Chain Lc

60S ribosomal protein L29

Chain Lp

Ribosomal protein L44