HL_8BR8_108

3D structure

PDB id

8BR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state (A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GGACGGAGACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BR8|1|Lt|G|2096
8BR8|1|Lt|G|2097
8BR8|1|Lt|A|2098
8BR8|1|Lt|C|2099
8BR8|1|Lt|G|2100
8BR8|1|Lt|G|2101
8BR8|1|Lt|A|2102
8BR8|1|Lt|G|2103
8BR8|1|Lt|A|2104
8BR8|1|Lt|C|2105
8BR8|1|Lt|C|2106

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LE

5S ribosomal RNA; 5S rRNA

Chain LL

Ribosomal protein L11