HL_8BRM_031
3D structure
- PDB id
- 8BRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state, no E-site tRNA (A6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GGACGAUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BRM_031 not in the Motif Atlas
- Homologous match to HL_8C3A_026
- Geometric discrepancy: 0.1975
- The information below is about HL_8C3A_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8BRM|1|Lt|G|858
8BRM|1|Lt|G|859
8BRM|1|Lt|A|860
8BRM|1|Lt|C|861
8BRM|1|Lt|G|862
8BRM|1|Lt|A|863
8BRM|1|Lt|U|864
8BRM|1|Lt|C|865
Current chains
- Chain Lt
- Large Subunit rRNA
Nearby chains
- Chain LE
- 5S ribosomal RNA; 5S rRNA
- Chain LH
- Ribosomal protein L7
- Chain Lf
- Ribosomal protein L32
- Chain Lg
- Ribosomal protein L35a
Coloring options: