HL_8BTK_024
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8BTK|1|A2|A|1254
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BTK_024 not in the Motif Atlas
- Homologous match to HL_8C3A_217
- Geometric discrepancy: 0.1397
- The information below is about HL_8C3A_217
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8BTK|1|A2|G|1246
8BTK|1|A2|A|1247
8BTK|1|A2|C|1248
8BTK|1|A2|B8N|1249
8BTK|1|A2|C|1250
8BTK|1|A2|A|1251
8BTK|1|A2|A|1252
8BTK|1|A2|C|1253
8BTK|1|A2|A|1254
8BTK|1|A2|C|1255
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AC
- Ribosomal protein S27a
- Chain AG
- uS14
- Chain AT
- Transfer RNA; tRNA
- Chain Ao
- 40S ribosomal protein uS19
- Chain Ap
- uS9
- Chain At
- 40S ribosomal protein uS10
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