HL_8BUU_047
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8BUU|1|A|A|1942
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BUU_047 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1699
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8BUU|1|A|G|1939
8BUU|1|A|U|1940
8BUU|1|A|A|1941
8BUU|1|A|A|1942
8BUU|1|A|C|1943
8BUU|1|A|U|1944
8BUU|1|A|A|1945
8BUU|1|A|U|1946
8BUU|1|A|A|1947
8BUU|1|A|A|1948
8BUU|1|A|C|1949
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain V
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: