HL_8BUU_050

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

8BUU|1|A|C|2174

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BUU_050 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.2213

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

8BUU|1|A|C|2172
8BUU|1|A|G|2173
8BUU|1|A|C|2174
8BUU|1|A|C|2175
8BUU|1|A|A|2176
8BUU|1|A|G|2177

Current chains

Chain A

23S rRNA

Nearby chains

Chain 9

ExpZ