HL_8BUU_065
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8BUU|1|A|G|2780, 8BUU|1|A|C|2784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BUU_065 not in the Motif Atlas
- Homologous match to HL_5J7L_199
- Geometric discrepancy: 0.0744
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
8BUU|1|A|C|2774
8BUU|1|A|U|2775
8BUU|1|A|G|2776
8BUU|1|A|A|2777
8BUU|1|A|A|2778
8BUU|1|A|A|2779
8BUU|1|A|G|2780
8BUU|1|A|C|2781
8BUU|1|A|A|2782
8BUU|1|A|U|2783
8BUU|1|A|C|2784
8BUU|1|A|U|2785
8BUU|1|A|A|2786
8BUU|1|A|A|2787
8BUU|1|A|G|2788
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
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