HL_8C00_012
3D structure
- PDB id
- 8C00 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGU
- Length
- 3 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C00_012 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.2766
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
8C00|1|2|G|486
8C00|1|2|G|487
8C00|1|2|U|501
Current chains
- Chain 2
- 18S rRNA precursor
Nearby chains
No other chains within 10ÅColoring options: