HL_8C00_024

3D structure

PDB id

8C00 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAUUGAGAGC

Length

10 nucleotides

Bulged bases

8C00|1|2|G|1245

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C00|1|2|G|1237
8C00|1|2|A|1238
8C00|1|2|U|1239
8C00|1|2|U|1240
8C00|1|2|G|1241
8C00|1|2|A|1242
8C00|1|2|G|1243
8C00|1|2|A|1244
8C00|1|2|G|1245
8C00|1|2|C|1248

Current chains

Chain 2

18S rRNA precursor

Nearby chains

Chain E

40S ribosomal protein S15

Chain e

Essential nuclear protein 1