3D structure

PDB id
8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGAAAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_85603.1
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
304

Unit IDs

8C3A|1|1|G|840
8C3A|1|1|G|841
8C3A|1|1|A|842
8C3A|1|1|A|843
8C3A|1|1|A|844
8C3A|1|1|C|845

Current chains

Chain 1
25S

Nearby chains

Chain AQ
60S ribosomal protein L43-A
Chain B
Small subunit ribosomal RNA; SSU rRNA
Chain N
40S ribosomal protein S11A
Chain P
40S ribosomal protein S13

Coloring options:

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