3D structure

PDB id
8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUAUUC
Length
6 nucleotides
Bulged bases
8C3A|1|4|U|125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_45177.2
Basepair signature
cWW-cWW-F-F
Number of instances in this motif group
2

Unit IDs

8C3A|1|4|G|124
8C3A|1|4|U|125
8C3A|1|4|A|126
8C3A|1|4|U|127
8C3A|1|4|U|128
8C3A|1|4|C|129

Current chains

Chain 4
5.8S

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain 8
60S ribosomal protein L25

Coloring options:

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