HL_8C3A_100

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUGAAAUGA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C3A|1|AS|U|1018
8C3A|1|AS|U|1019
8C3A|1|AS|G|1020
8C3A|1|AS|A|1021
8C3A|1|AS|A|1022
8C3A|1|AS|A|1023
8C3A|1|AS|U|1024
8C3A|1|AS|G|1025
8C3A|1|AS|A|1026

Current chains

Chain AS

25S

Nearby chains

Chain BF

60S ribosomal protein L11-B

Chain CL

60S ribosomal protein CAALFM_C304810CA

Chain CM

Small subunit ribosomal RNA; SSU rRNA

Chain DC

40S ribosomal protein S15