HL_8C3A_148
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCAUACGAC
- Length
- 9 nucleotides
- Bulged bases
- 8C3A|1|AS|C|3269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C3A_148 not in the Motif Atlas
- Geometric match to HL_5TBW_070
- Geometric discrepancy: 0.1002
- The information below is about HL_5TBW_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.4
- Basepair signature
- cWW-cSW-F-F-F-cWW
- Number of instances in this motif group
- 9
Unit IDs
8C3A|1|AS|G|3268
8C3A|1|AS|C|3269
8C3A|1|AS|A|3270
8C3A|1|AS|U|3271
8C3A|1|AS|A|3272
8C3A|1|AS|C|3273
8C3A|1|AS|G|3274
8C3A|1|AS|A|3275
8C3A|1|AS|C|3276
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AX
- 60S ribosomal protein L3
- Chain BK
- Ribosomal protein L22
- Chain BY
- 60S ribosomal protein L31-B
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