3D structure

PDB id
8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CCAAGG
Length
6 nucleotides
Bulged bases (A, C, G, U)
414A
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_29960.1
Basepair signature
cWW-tSW-F
Number of instances in this motif group
59

Unit IDs

8C3A|1|CM|C|412
8C3A|1|CM|C|413
8C3A|1|CM|A|414
8C3A|1|CM|A|415
8C3A|1|CM|G|416
8C3A|1|CM|G|417

Current chains

Chain CM
18S

Nearby chains

Chain BQ
60S ribosomal protein L23-A
Chain CT
40S ribosomal protein S6

Coloring options:

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