HL_8C3A_215

3D structure

PDB id

8C3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ailanthone bound to the Candida albicans 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85603.1

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

304

Unit IDs

8C3A|1|CM|A|1069
8C3A|1|CM|G|1070
8C3A|1|CM|A|1071
8C3A|1|CM|A|1072
8C3A|1|CM|A|1073
8C3A|1|CM|U|1074

Current chains

Chain CM

18S

Nearby chains

Chain CP

Ribosomal protein S5

Chain DJ

40S ribosomal protein S22-A

Chain DN

40S ribosomal protein S26