HL_8C6J_003
3D structure
- PDB id
- 8C6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human spliceosomal PM5 C* complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCCUUUUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8C6J|1|5|G|37
8C6J|1|5|C|38
8C6J|1|5|C|39
8C6J|1|5|U|40
8C6J|1|5|U|41
8C6J|1|5|U|42
8C6J|1|5|U|43
8C6J|1|5|A|44
8C6J|1|5|C|45
Current chains
- Chain 5
- U5 snRNA
Nearby chains
- Chain 6
- U6 spliceosomal RNA; U6 snRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain E
- PM5 5' Exon
- Chain I
- PM5 Intron
- Chain P
- Spliceosome-associated protein CWC15 homolog
- Chain R
- Serine/arginine repetitive matrix protein 2
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