8C6J Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8C6J_003 | 1/5/37:45 | No text annotation | ||
| HL_8C6J_006 | 1/6/64:70 | GNRA variation | homologous HL_5VSU_001 HL_34789.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8C6J_001 | No text annotation | ||
| HL_8C6J_002 | No text annotation | ||
| HL_8C6J_004 | No text annotation | ||
| HL_8C6J_005 | Mini UNCG | ||
| HL_8C6J_007 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8C6J_002 | 1/2/8:10, 1/6/88:90 | No text annotation | ||
| IL_8C6J_003 | 1/2/22:25, 1/6/52:53 | No text annotation | ||
| IL_8C6J_007 | 1/5/8:9, 1/5/68:73 | No text annotation | ||
| IL_8C6J_008 | 1/5/19:23, 1/5/57:58 | No text annotation | ||
| IL_8C6J_009 | 1/5/24:28, 1/5/54:56 | No text annotation | ||
| IL_8C6J_010 | 1/5/35:37, 1/5/45:47 | No text annotation | ||
| IL_8C6J_011 | 1/6/4:7, 1/6/14:16 | Isolated non-canonical cWW with bulges | geometric IL_4V9F_097 IL_68118.4 | |
| IL_8C6J_012 | 1/6/58:61, 1/6/75:77 | Isolated non-canonical cWW pair | geometric IL_3TD0_005 NA | |
| IL_8C6J_013 | 1/6/61:62, 1/6/72:75 | No text annotation | geometric IL_8VTW_097 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8C6J_001 | No text annotation | ||
| IL_8C6J_004 | No text annotation | ||
| IL_8C6J_005 | No text annotation | ||
| IL_8C6J_006 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_8C6J_001 | 1/2/11:20, 1/6/55:57, 1/6/78:87 | No text annotation |
Problematic loops
No problematic loops
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