HL_8C6J_004

3D structure

PDB id

8C6J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human spliceosomal PM5 C* complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCUUGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C6J|1|5|C|103
8C6J|1|5|C|104
8C6J|1|5|U|105
8C6J|1|5|U|106
8C6J|1|5|G|107
8C6J|1|5|G|108

Current chains

Chain 5

U5 snRNA

Nearby chains

Chain a

Small nuclear ribonucleoprotein Sm D2

Chain b

Small nuclear ribonucleoprotein-associated proteins B and B'

Chain c

Small nuclear ribonucleoprotein Sm D1