HL_8C8Y_049
3D structure
- PDB id
- 8C8Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 8C8Y|1|A|U|2249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C8Y_049 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3206
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8C8Y|1|A|C|2248
8C8Y|1|A|U|2249
8C8Y|1|A|G|2250
8C8Y|1|A|G|2251
8C8Y|1|A|G|2252
8C8Y|1|A|G|2253
8C8Y|1|A|C|2254
8C8Y|1|A|G|2255
8C8Y|1|A|G|2256
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain W
- 50S ribosomal protein L27
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