HL_8C90_023

3D structure

PDB id

8C90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GGCAACCC

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C90_023 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.366

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8C90|1|A|G|874
8C90|1|A|G|875
8C90|1|A|C|876
8C90|1|A|A|877
8C90|1|A|A|900
8C90|1|A|C|901
8C90|1|A|C|902
8C90|1|A|C|903

Current chains

Chain A

23S rRNA

Nearby chains