HL_8C91_021

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

8C91|1|A|A|715, 8C91|1|A|A|716

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C91_021 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.3051

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8C91|1|A|G|712
8C91|1|A|G|713
8C91|1|A|U|714
8C91|1|A|A|715
8C91|1|A|A|716
8C91|1|A|C|717
8C91|1|A|A|718
8C91|1|A|C|719

Current chains

Chain A

23S rRNA

Nearby chains