HL_8C91_022

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

UGUUGAAAAA

Length

10 nucleotides

Bulged bases

8C91|1|A|U|747, 8C91|1|A|A|751

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C91_022 not in the Motif Atlas

Homologous match to HL_4WF9_023

Geometric discrepancy: 0.262

The information below is about HL_4WF9_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

8C91|1|A|U|744
8C91|1|A|G|745
8C91|1|A|U|746
8C91|1|A|U|747
8C91|1|A|G|748
8C91|1|A|A|749
8C91|1|A|A|750
8C91|1|A|A|751
8C91|1|A|A|752
8C91|1|A|A|753

Current chains

Chain A

23S rRNA

Nearby chains