HL_8C91_045

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

CUGGAAUG

Length

8 nucleotides

Bulged bases

8C91|1|A|G|1968, 8C91|1|A|U|1971

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C91_045 not in the Motif Atlas

Geometric match to HL_8KAL_003

Geometric discrepancy: 0.3868

The information below is about HL_8KAL_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

8C91|1|A|C|1833
8C91|1|A|U|1834
8C91|1|A|G|1835
8C91|1|A|G|1968
8C91|1|A|A|1969
8C91|1|A|A|1970
8C91|1|A|U|1971
8C91|1|A|G|1972

Current chains

Chain A

23S rRNA

Nearby chains