HL_8C94_032
3D structure
- PDB id
- 8C94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UCGGGUGAAGGAACA
- Length
- 15 nucleotides
- Bulged bases
- 8C94|1|A|G|1663
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C94_032 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1494
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.7
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 22
Unit IDs
8C94|1|A|U|1657
8C94|1|A|C|1658
8C94|1|A|G|1659
8C94|1|A|G|1660
8C94|1|A|G|1661
8C94|1|A|U|1662
8C94|1|A|G|1663
8C94|1|A|A|1664
8C94|1|A|A|1665
8C94|1|A|G|1666
8C94|1|A|G|1667
8C94|1|A|A|1668
8C94|1|A|A|1669
8C94|1|A|C|1670
8C94|1|A|A|2003
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain N
- 50S ribosomal protein L17
- Chain P
- 50S ribosomal protein L19
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