HL_8C95_030

3D structure

PDB id

8C95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.92 Å

Loop

Sequence

GUGUGC

Length

6 nucleotides

Bulged bases

8C95|1|A|U|2034, 8C95|1|A|G|2035

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C95_030 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1912

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

8C95|1|A|G|2027
8C95|1|A|U|2028
8C95|1|A|G|2029
8C95|1|A|U|2034
8C95|1|A|G|2035
8C95|1|A|C|2036

Current chains

Chain A

23S rRNA

Nearby chains