HL_8C99_026

3D structure

PDB id

8C99 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time limited cryo-EM reveals early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

8C99|1|A|U|1174

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C99_026 not in the Motif Atlas

Homologous match to HL_7RQB_031

Geometric discrepancy: 0.5678

The information below is about HL_7RQB_031

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_94651.3

Basepair signature

cWW-tSS

Number of instances in this motif group

6

Unit IDs

8C99|1|A|C|1172
8C99|1|A|U|1173
8C99|1|A|U|1174
8C99|1|A|A|1175
8C99|1|A|U|1176
8C99|1|A|G|1177

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15