HL_8C9A_020

3D structure

PDB id

8C9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.86 Å

Loop

Sequence

CGGGACACGUGGUAUCCUG

Length

19 nucleotides

Bulged bases

8C9A|1|A|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C9A|1|A|C|378
8C9A|1|A|G|379
8C9A|1|A|G|380
8C9A|1|A|G|381
8C9A|1|A|A|382
8C9A|1|A|C|383
8C9A|1|A|A|384
8C9A|1|A|C|385
8C9A|1|A|G|386
8C9A|1|A|U|387
8C9A|1|A|G|388
8C9A|1|A|G|389
8C9A|1|A|U|390
8C9A|1|A|A|391
8C9A|1|A|U|392
8C9A|1|A|C|393
8C9A|1|A|C|394
8C9A|1|A|U|395
8C9A|1|A|G|396

Current chains

Chain A

23S rRNA

Nearby chains