HL_8CGV_016

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8CGV|1|a|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CGV_016 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.2753

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

8CGV|1|a|C|544
8CGV|1|a|U|545
8CGV|1|a|U|546
8CGV|1|a|A|547
8CGV|1|a|G|548
8CGV|1|a|G|549

Current chains

Chain a

23S rRNA

Nearby chains

Chain q

Large ribosomal subunit protein bL21