HL_8CRE_048

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

8CRE|1|1|U|2276

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

8CRE|1|1|U|2270
8CRE|1|1|C|2271
8CRE|1|1|U|2272
8CRE|1|1|A|2273
8CRE|1|1|A|2274
8CRE|1|1|U|2275
8CRE|1|1|U|2276
8CRE|1|1|A|2277
8CRE|1|1|G|2278

Current chains

Chain 1

25S

Nearby chains

Chain 6

60S ribosomal protein L23-A

Chain B

Small subunit ribosomal RNA; SSU rRNA