HL_8CRE_129
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGUCAAAC
- Length
- 8 nucleotides
- Bulged bases
- 8CRE|1|AS|C|2517, 8CRE|1|AS|A|2518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRE_129 not in the Motif Atlas
- Homologous match to HL_8C3A_053
- Geometric discrepancy: 0.1218
- The information below is about HL_8C3A_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19906.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8CRE|1|AS|G|2514
8CRE|1|AS|G|2515
8CRE|1|AS|U|2516
8CRE|1|AS|C|2517
8CRE|1|AS|A|2518
8CRE|1|AS|A|2519
8CRE|1|AS|A|2520
8CRE|1|AS|C|2521
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BC
- 60S ribosomal protein L8
- Chain CO
- 40S ribosomal protein S1
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