HL_8CRE_137
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGAAUUUG
- Length
- 9 nucleotides
- Bulged bases
- 8CRE|1|AS|G|2749
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRE_137 not in the Motif Atlas
- Homologous match to HL_8C3A_061
- Geometric discrepancy: 0.0535
- The information below is about HL_8C3A_061
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
8CRE|1|AS|C|2748
8CRE|1|AS|G|2749
8CRE|1|AS|G|2750
8CRE|1|AS|A|2751
8CRE|1|AS|A|2752
8CRE|1|AS|U|2753
8CRE|1|AS|U|2754
8CRE|1|AS|U|2755
8CRE|1|AS|G|2756
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BG
- 60S ribosomal protein L13
- Chain BV
- 60S ribosomal protein L28
- Chain CD
- 60S ribosomal protein L36
- Chain CJ
- 60S ribosomal protein L42-B
Coloring options: