HL_8CRE_181
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 8CRE|1|B|A|1181
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRE_181 not in the Motif Atlas
- Homologous match to HL_8C3A_217
- Geometric discrepancy: 0.058
- The information below is about HL_8C3A_217
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8CRE|1|B|G|1173
8CRE|1|B|A|1174
8CRE|1|B|C|1175
8CRE|1|B|U|1176
8CRE|1|B|C|1177
8CRE|1|B|A|1178
8CRE|1|B|A|1179
8CRE|1|B|C|1180
8CRE|1|B|A|1181
8CRE|1|B|C|1182
Current chains
- Chain B
- 18S
Nearby chains
- Chain S
- 40S ribosomal protein S16
- Chain W
- Ribosomal protein S10
- Chain f
- 40S ribosomal protein S29A
- Chain i
- 60S ribosomal protein CAALFM_C304810CA
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