HL_8CRE_206

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUAGCCAUUUAUGGCGAAC

Length

20 nucleotides

Bulged bases

8CRE|1|CM|U|711, 8CRE|1|CM|A|712, 8CRE|1|CM|U|713, 8CRE|1|CM|G|717, 8CRE|1|CM|A|718

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85461.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

8CRE|1|CM|G|701
8CRE|1|CM|G|702
8CRE|1|CM|U|703
8CRE|1|CM|A|704
8CRE|1|CM|G|705
8CRE|1|CM|C|706
8CRE|1|CM|C|707
8CRE|1|CM|A|708
8CRE|1|CM|U|709
8CRE|1|CM|U|710
8CRE|1|CM|U|711
8CRE|1|CM|A|712
8CRE|1|CM|U|713
8CRE|1|CM|G|714
8CRE|1|CM|G|715
8CRE|1|CM|C|716
8CRE|1|CM|G|717
8CRE|1|CM|A|718
8CRE|1|CM|A|719
8CRE|1|CM|C|720

Current chains

Chain CM

18S

Nearby chains

Chain CT

40S ribosomal protein S6