3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGUAGCCAUUUAUGGCGAAC
Length
20 nucleotides
Bulged bases
8CRE|1|CM|U|711, 8CRE|1|CM|A|712, 8CRE|1|CM|U|713, 8CRE|1|CM|G|717, 8CRE|1|CM|A|718
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_85461.1
Basepair signature
cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
1

Unit IDs

8CRE|1|CM|G|701
8CRE|1|CM|G|702
8CRE|1|CM|U|703
8CRE|1|CM|A|704
8CRE|1|CM|G|705
8CRE|1|CM|C|706
8CRE|1|CM|C|707
8CRE|1|CM|A|708
8CRE|1|CM|U|709
8CRE|1|CM|U|710
8CRE|1|CM|U|711
8CRE|1|CM|A|712
8CRE|1|CM|U|713
8CRE|1|CM|G|714
8CRE|1|CM|G|715
8CRE|1|CM|C|716
8CRE|1|CM|G|717
8CRE|1|CM|A|718
8CRE|1|CM|A|719
8CRE|1|CM|C|720

Current chains

Chain CM
18S

Nearby chains

Chain CT
40S ribosomal protein S6

Coloring options:

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