HL_8CRE_209

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAUUUUGUUGGUUUCUA

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_99324.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8CRE|1|CM|U|813
8CRE|1|CM|A|814
8CRE|1|CM|U|815
8CRE|1|CM|U|816
8CRE|1|CM|U|817
8CRE|1|CM|U|818
8CRE|1|CM|G|819
8CRE|1|CM|U|820
8CRE|1|CM|U|821
8CRE|1|CM|G|822
8CRE|1|CM|G|823
8CRE|1|CM|U|824
8CRE|1|CM|U|825
8CRE|1|CM|U|826
8CRE|1|CM|C|827
8CRE|1|CM|U|828
8CRE|1|CM|A|829

Current chains

Chain CM

18S

Nearby chains

Chain CY

40S ribosomal protein S11A