HL_8CRE_212

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUCAGAUACC

Length

11 nucleotides

Bulged bases

8CRE|1|CM|U|989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

8CRE|1|CM|G|982
8CRE|1|CM|A|983
8CRE|1|CM|U|984
8CRE|1|CM|C|985
8CRE|1|CM|A|986
8CRE|1|CM|G|987
8CRE|1|CM|A|988
8CRE|1|CM|U|989
8CRE|1|CM|A|990
8CRE|1|CM|C|991
8CRE|1|CM|C|992

Current chains

Chain CM

18S

Nearby chains

Chain AS

Large subunit ribosomal RNA; LSU rRNA

Chain DB

40S ribosomal protein S14-A

Chain DN

40S ribosomal protein S26