HL_8CRX_044

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUGCCG

Length

6 nucleotides

Bulged bases

8CRX|1|a|C|346

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_044 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2609

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8CRX|1|a|C|343
8CRX|1|a|U|344
8CRX|1|a|G|345
8CRX|1|a|C|346
8CRX|1|a|C|347
8CRX|1|a|G|348

Current chains

Chain a

23S ribosomal RNA

Nearby chains