HL_8CRX_058
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- AGUUGAAAAU
- Length
- 10 nucleotides
- Bulged bases
- 8CRX|1|a|U|832, 8CRX|1|a|A|836, 8CRX|1|a|A|837
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CRX_058 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.1339
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
8CRX|1|a|A|829
8CRX|1|a|G|830
8CRX|1|a|U|831
8CRX|1|a|U|832
8CRX|1|a|G|833
8CRX|1|a|A|834
8CRX|1|a|A|835
8CRX|1|a|A|836
8CRX|1|a|A|837
8CRX|1|a|U|838
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain d
- 50S ribosomal protein L3
- Chain r
- 50S ribosomal protein L22
- Chain z
- 50S ribosomal protein L32
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