HL_8CRX_063

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_063 not in the Motif Atlas

Homologous match to HL_4WF9_028

Geometric discrepancy: 0.0987

The information below is about HL_4WF9_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

8CRX|1|a|G|1061
8CRX|1|a|A|1062
8CRX|1|a|A|1063
8CRX|1|a|A|1064
8CRX|1|a|C|1065
8CRX|1|a|A|1066
8CRX|1|a|G|1067
8CRX|1|a|C|1068

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein bL37

Chain b

5S ribosomal RNA; 5S rRNA

Chain y

50S ribosomal protein L30