HL_8CRX_067

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_067 not in the Motif Atlas

Homologous match to HL_4WF9_031

Geometric discrepancy: 0.1432

The information below is about HL_4WF9_031

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

8CRX|1|a|G|1298
8CRX|1|a|G|1299
8CRX|1|a|U|1300
8CRX|1|a|G|1301
8CRX|1|a|A|1302
8CRX|1|a|C|1303

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain p

50S ribosomal protein L20

Chain q

50S ribosomal protein L21