HL_8CRX_071

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

8CRX|1|a|U|1472, 8CRX|1|a|U|1473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_071 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1261

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8CRX|1|a|G|1465
8CRX|1|a|U|1466
8CRX|1|a|U|1467
8CRX|1|a|G|1468
8CRX|1|a|A|1469
8CRX|1|a|U|1470
8CRX|1|a|A|1471
8CRX|1|a|U|1472
8CRX|1|a|U|1473
8CRX|1|a|C|1474

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain s

50S ribosomal protein L23