HL_8CRX_095

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUUGUGGAUG

Length

10 nucleotides

Bulged bases

8CRX|1|a|U|2588

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRX_095 not in the Motif Atlas

Geometric match to HL_2AKE_002

Geometric discrepancy: 0.3752

The information below is about HL_2AKE_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_11974.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

19

Unit IDs

8CRX|1|a|C|2586
8CRX|1|a|U|2587
8CRX|1|a|U|2588
8CRX|1|a|G|2589
8CRX|1|a|U|2590
8CRX|1|a|G|2591
8CRX|1|a|G|2592
8CRX|1|a|A|2593
8CRX|1|a|U|2594
8CRX|1|a|G|2595

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L15