HL_8CSP_011

3D structure

PDB id

8CSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

8CSP|1|A|G|1079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSP|1|A|G|1074
8CSP|1|A|A|1075
8CSP|1|A|U|1076
8CSP|1|A|U|1077
8CSP|1|A|A|1078
8CSP|1|A|G|1079
8CSP|1|A|A|1080
8CSP|1|A|U|1081
8CSP|1|A|A|1082
8CSP|1|A|C|1083
8CSP|1|A|C|1084

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 5

Dimethyladenosine transferase 1, mitochondrial

Chain a

GTPase Era, mitochondrial